Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB42Q8N4Z0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB42Q8N4Z0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB42Q8N4Z0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 AC141586.5-201ENST00000624546 2050 ntBASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 AL031284.1-201ENST00000419297 478 ntBASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAB42Q8N4Z0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
RAB42Q8N4Z0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.71■□□□□ 0.26
RAB42Q8N4Z0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.26
RAB42Q8N4Z0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RAB42Q8N4Z0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 FZD10-202ENST00000539839 3282 ntBASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 AC136632.2-201ENST00000512891 861 ntBASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 AL121894.2-201ENST00000602977 491 ntBASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 AC005593.1-201ENST00000624894 515 ntBASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB42Q8N4Z0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 FAM215A-202ENST00000632077 792 ntBASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms