Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AC136632.2-201ENST00000512891 861 ntBASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 AC243591.1-201ENST00000452967 1364 ntBASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 AC092068.3-201ENST00000587894 2016 ntBASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 MIR1199-201ENST00000621445 119 ntBASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCUBE3Q8IX30 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 RPS15P9-201ENST00000494093 319 ntBASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 PI4KAP1-204ENST00000612579 1703 ntBASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCUBE3Q8IX30 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 FRMD8P1-201ENST00000440433 1524 ntBASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms