Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 CROCCP5-201ENST00000436658 830 ntBASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AC130371.2-201ENST00000619443 611 ntBASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 SNX18-202ENST00000343017 3140 ntBASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 FLJ16779-201ENST00000612722 7638 ntBASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CROCCP3Q8IVE0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 AC100803.2-201ENST00000562459 1963 ntBASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CROCCP3Q8IVE0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 LINC02012-201ENST00000608206 1725 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 TSPY6P-201ENST00000448518 926 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC022517.1-201ENST00000592429 346 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AL031985.4-201ENST00000642138 673 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC046185.3-201ENST00000623228 1824 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms