Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 LINC00982-205ENST00000420957 435 ntBASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 AL591684.3-201ENST00000605187 298 ntBASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE8Q86YQ8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 AL603756.1-201ENST00000606511 2163 ntBASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 AC073592.4-201ENST00000623827 446 ntBASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE8Q86YQ8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CPNE8Q86YQ8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.96■□□□□ 0.46
CPNE8Q86YQ8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 AC092364.2-201ENST00000596710 2692 ntBASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 UPK3BP1-201ENST00000428678 509 ntBASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 AC064862.7-201ENST00000604520 867 ntBASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 AP005117.1-201ENST00000584346 1413 ntBASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 SIGLEC16-201ENST00000599858 1437 ntBASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CPNE8Q86YQ8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE8Q86YQ8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms