Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 RBM17P3-201ENST00000417687 1192 ntBASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 MTDHP3-201ENST00000594186 672 ntBASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 KRT8P10-201ENST00000450021 1447 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 ABCD1P5-201ENST00000445663 754 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 AL031008.1-201ENST00000619963 541 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 MIR600HG-201ENST00000449175 5984 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 AC012317.2-201ENST00000623305 2251 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 BX276092.7-203ENST00000637198 1536 ntBASIC15.89■□□□□ 0.13
CHMP1BQ7LBR1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AF186996.4-201ENST00000467186 377 ntBASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AC122714.2-201ENST00000502787 707 ntBASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AF238378.1-201ENST00000526806 358 ntBASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 AL662844.1-201ENST00000546340 181 ntBASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP1BQ7LBR1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms