Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13□□□□□ -0.33
MRPL54Q6P161 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 AC093525.9-201ENST00000624961 1746 ntBASIC13□□□□□ -0.33
MRPL54Q6P161 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MRPL54Q6P161 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13□□□□□ -0.33
MRPL54Q6P161 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MRPL54Q6P161 PPP1R14BP5-201ENST00000440334 435 ntBASIC13□□□□□ -0.33
MRPL54Q6P161 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13□□□□□ -0.33
MRPL54Q6P161 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13□□□□□ -0.33
MRPL54Q6P161 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13□□□□□ -0.33
MRPL54Q6P161 ABBA01031674.1-201ENST00000635145 728 ntBASIC13□□□□□ -0.33
MRPL54Q6P161 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13□□□□□ -0.33
MRPL54Q6P161 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MRPL54Q6P161 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MRPL54Q6P161 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL54Q6P161 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MRPL54Q6P161 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL54Q6P161 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms