Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNAPC4Q5SXM2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 DOC2GP-202ENST00000514950 1163 ntBASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SNAPC4Q5SXM2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 AC004945.1-201ENST00000416738 983 ntBASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 AL079307.3-201ENST00000556114 283 ntBASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 BX323043.1-201ENST00000641006 1765 ntBASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC27.58■■■□□ 2.01
SNAPC4Q5SXM2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AC234783.1-201ENST00000441761 496 ntBASIC27.57■■■□□ 2
SNAPC4Q5SXM2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 BNIP3P42-201ENST00000454982 569 ntBASIC27.57■■■□□ 2
SNAPC4Q5SXM2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC27.57■■■□□ 2
SNAPC4Q5SXM2 BNIP3P29-201ENST00000598302 571 ntBASIC27.57■■■□□ 2
SNAPC4Q5SXM2 LINC00896-202ENST00000609602 2128 ntBASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AC011447.5-201ENST00000616168 564 ntBASIC27.57■■■□□ 2
SNAPC4Q5SXM2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 LYSMD4-203ENST00000378904 2122 ntBASIC27.56■■■□□ 2
SNAPC4Q5SXM2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC27.56■■■□□ 2
SNAPC4Q5SXM2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 LINC00304-203ENST00000565008 1864 ntBASIC27.56■■■□□ 2
SNAPC4Q5SXM2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC27.56■■■□□ 2
SNAPC4Q5SXM2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 AC131009.4-201ENST00000624048 1740 ntBASIC27.55■■■□□ 2
SNAPC4Q5SXM2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms