Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.1■□□□□ 0.49
DSC1Q08554 KRT8P49-201ENST00000604166 1432 ntBASIC18.1■□□□□ 0.49
DSC1Q08554 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.1■□□□□ 0.49
DSC1Q08554 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DSC1Q08554 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.1■□□□□ 0.49
DSC1Q08554 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.1■□□□□ 0.49
DSC1Q08554 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 AL031055.1-201ENST00000606362 631 ntBASIC18.1■□□□□ 0.49
DSC1Q08554 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
DSC1Q08554 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DSC1Q08554 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DSC1Q08554 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.1■□□□□ 0.49
DSC1Q08554 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.1■□□□□ 0.49
DSC1Q08554 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
DSC1Q08554 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DSC1Q08554 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 AC131009.4-201ENST00000624048 1740 ntBASIC18.09■□□□□ 0.49
DSC1Q08554 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.09■□□□□ 0.49
DSC1Q08554 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.09■□□□□ 0.49
DSC1Q08554 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 KRT18P32-201ENST00000424695 1287 ntBASIC18.09■□□□□ 0.49
DSC1Q08554 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.09■□□□□ 0.49
DSC1Q08554 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 AL512356.2-201ENST00000546955 174 ntBASIC18.09■□□□□ 0.49
DSC1Q08554 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.09■□□□□ 0.49
DSC1Q08554 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DSC1Q08554 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
DSC1Q08554 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DSC1Q08554 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.08■□□□□ 0.49
DSC1Q08554 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
DSC1Q08554 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.08■□□□□ 0.49
DSC1Q08554 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
DSC1Q08554 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.08■□□□□ 0.49
DSC1Q08554 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DSC1Q08554 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DSC1Q08554 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DSC1Q08554 WASH6P-202ENST00000359512 1437 ntBASIC18.08■□□□□ 0.49
DSC1Q08554 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DSC1Q08554 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.08■□□□□ 0.49
DSC1Q08554 NOC2LP2-201ENST00000407594 1944 ntBASIC18.08■□□□□ 0.49
DSC1Q08554 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.08■□□□□ 0.49
DSC1Q08554 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DSC1Q08554 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.08■□□□□ 0.48
DSC1Q08554 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 PMS2P4-201ENST00000412466 1052 ntBASIC18.08■□□□□ 0.48
DSC1Q08554 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 KRT8P23-201ENST00000560090 1207 ntBASIC18.08■□□□□ 0.48
DSC1Q08554 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DSC1Q08554 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
DSC1Q08554 MIR4492-201ENST00000581627 80 ntBASIC18.08■□□□□ 0.48
DSC1Q08554 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DSC1Q08554 Z92544.3-201ENST00000624747 417 ntBASIC18.08■□□□□ 0.48
DSC1Q08554 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.08■□□□□ 0.48
DSC1Q08554 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DSC1Q08554 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.08■□□□□ 0.48
DSC1Q08554 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
DSC1Q08554 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.08■□□□□ 0.48
DSC1Q08554 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
DSC1Q08554 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms