Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCNA1P78396 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNA1P78396 SPDYE14P-201ENST00000442619 822 ntBASIC19.4■□□□□ 0.7
CCNA1P78396 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNA1P78396 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNA1P78396 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNA1P78396 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.4■□□□□ 0.7
CCNA1P78396 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNA1P78396 AF228730.6-201ENST00000641497 218 ntBASIC19.4■□□□□ 0.7
CCNA1P78396 AC084121.3-201ENST00000641716 218 ntBASIC19.4■□□□□ 0.7
CCNA1P78396 AC105233.6-201ENST00000642093 218 ntBASIC19.4■□□□□ 0.7
CCNA1P78396 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNA1P78396 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNA1P78396 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNA1P78396 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CCNA1P78396 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNA1P78396 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNA1P78396 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCNA1P78396 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCNA1P78396 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
CCNA1P78396 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.39■□□□□ 0.7
CCNA1P78396 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCNA1P78396 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
CCNA1P78396 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC236430.1-201ENST00000402231 743 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC002472.2-201ENST00000442739 958 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.39■□□□□ 0.69
CCNA1P78396 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC091167.2-201ENST00000579581 588 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 AL158211.3-201ENST00000607385 239 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNA1P78396 AC008267.7-201ENST00000624570 1194 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.39■□□□□ 0.69
CCNA1P78396 FO538757.1-201ENST00000623083 1397 ntBASIC19.39■□□□□ 0.69
CCNA1P78396 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCNA1P78396 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.39■□□□□ 0.69
CCNA1P78396 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNA1P78396 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNA1P78396 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNA1P78396 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCNA1P78396 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCNA1P78396 AC015922.1-201ENST00000421102 1152 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 TREML5P-201ENST00000421694 576 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 FAM207CP-201ENST00000443486 507 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 AL512638.1-201ENST00000457493 794 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCNA1P78396 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNA1P78396 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNA1P78396 MIR3909-201ENST00000579518 119 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 AL031055.1-201ENST00000606362 631 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNA1P78396 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CCNA1P78396 AP001350.2-201ENST00000625104 1094 ntBASIC19.38■□□□□ 0.69
CCNA1P78396 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNA1P78396 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNA1P78396 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNA1P78396 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNA1P78396 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNA1P78396 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms