Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.15□□□□□ -0.3
SNRPEP62304 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.15□□□□□ -0.3
SNRPEP62304 AC026396.1-201ENST00000419388 421 ntBASIC13.15□□□□□ -0.3
SNRPEP62304 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.15□□□□□ -0.3
SNRPEP62304 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 AC103834.1-201ENST00000520383 144 ntBASIC13.15□□□□□ -0.3
SNRPEP62304 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.15□□□□□ -0.3
SNRPEP62304 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.15□□□□□ -0.3
SNRPEP62304 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.15□□□□□ -0.3
SNRPEP62304 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.15□□□□□ -0.3
SNRPEP62304 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
SNRPEP62304 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 AC008764.7-201ENST00000593779 1081 ntBASIC13.14□□□□□ -0.31
SNRPEP62304 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.14□□□□□ -0.31
SNRPEP62304 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNRPEP62304 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.14□□□□□ -0.31
SNRPEP62304 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 Z82170.1-201ENST00000625081 3192 ntBASIC13.14□□□□□ -0.31
SNRPEP62304 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNRPEP62304 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 REXO1L11P-201ENST00000620964 1927 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 AC232323.1-201ENST00000540724 2099 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 REXO1L5P-201ENST00000622260 2098 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 HLA-A-202ENST00000376806 1854 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 LINC01101-201ENST00000622953 1884 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 AC105233.4-201ENST00000642045 216 ntBASIC13.13□□□□□ -0.31
SNRPEP62304 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNRPEP62304 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.13□□□□□ -0.31
SNRPEP62304 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
SNRPEP62304 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms