Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 IGHV3-47-201ENST00000425060 335 ntBASIC16.33■□□□□ 0.2
CLDN8P56748 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN8P56748 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN8P56748 AP000867.4-201ENST00000641616 219 ntBASIC16.33■□□□□ 0.2
CLDN8P56748 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN8P56748 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN8P56748 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN8P56748 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLDN8P56748 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN8P56748 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
CLDN8P56748 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLDN8P56748 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN8P56748 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 AL020989.1-201ENST00000422979 469 ntBASIC16.32■□□□□ 0.2
CLDN8P56748 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN8P56748 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CLDN8P56748 TOB2P1-201ENST00000469761 992 ntBASIC16.32■□□□□ 0.2
CLDN8P56748 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN8P56748 AC096582.2-201ENST00000510860 516 ntBASIC16.32■□□□□ 0.2
CLDN8P56748 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN8P56748 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 AL049597.2-201ENST00000565575 961 ntBASIC16.32■□□□□ 0.2
CLDN8P56748 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CLDN8P56748 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN8P56748 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CLDN8P56748 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 AC018695.7-201ENST00000624587 2492 ntBASIC16.32■□□□□ 0.2
CLDN8P56748 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN8P56748 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN8P56748 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 AC148477.5-201ENST00000625164 1645 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN8P56748 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 POM121L3P-201ENST00000419331 1163 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 PCED1CP-201ENST00000419887 785 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 NUS1P1-201ENST00000446295 882 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN8P56748 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN8P56748 AP002414.4-201ENST00000589764 1148 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN8P56748 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 AL645728.1-201ENST00000366221 2101 ntBASIC16.31■□□□□ 0.2
CLDN8P56748 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN8P56748 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN8P56748 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms