Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH8P55286 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH8P55286 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 FRMD8P1-201ENST00000440433 1524 ntBASIC18.29■□□□□ 0.52
CDH8P55286 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH8P55286 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH8P55286 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH8P55286 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 AC060834.1-201ENST00000443027 2032 ntBASIC18.29■□□□□ 0.52
CDH8P55286 AC092068.3-201ENST00000587894 2016 ntBASIC18.29■□□□□ 0.52
CDH8P55286 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH8P55286 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH8P55286 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH8P55286 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH8P55286 AC145285.3-201ENST00000564603 959 ntBASIC18.29■□□□□ 0.52
CDH8P55286 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CDH8P55286 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH8P55286 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CDH8P55286 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH8P55286 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH8P55286 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH8P55286 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.28■□□□□ 0.52
CDH8P55286 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH8P55286 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.28■□□□□ 0.52
CDH8P55286 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.28■□□□□ 0.52
CDH8P55286 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 AC106730.1-201ENST00000566722 1090 ntBASIC18.28■□□□□ 0.52
CDH8P55286 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH8P55286 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH8P55286 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDH8P55286 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDH8P55286 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
CDH8P55286 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH8P55286 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.27■□□□□ 0.52
CDH8P55286 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 OR7E47P-204ENST00000575924 449 ntBASIC18.27■□□□□ 0.52
CDH8P55286 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH8P55286 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CDH8P55286 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH8P55286 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH8P55286 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CDH8P55286 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDH8P55286 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDH8P55286 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms