Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN3P51790 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLCN3P51790 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLCN3P51790 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CLCN3P51790 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 PMS2P2-201ENST00000425039 1128 ntBASIC18.77■□□□□ 0.6
CLCN3P51790 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCN3P51790 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.77■□□□□ 0.6
CLCN3P51790 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN3P51790 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN3P51790 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CLCN3P51790 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN3P51790 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLCN3P51790 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN3P51790 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CLCN3P51790 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.77■□□□□ 0.59
CLCN3P51790 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN3P51790 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN3P51790 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.77■□□□□ 0.59
CLCN3P51790 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN3P51790 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN3P51790 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCN3P51790 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN3P51790 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCN3P51790 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLCN3P51790 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CLCN3P51790 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.76■□□□□ 0.59
CLCN3P51790 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN3P51790 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLCN3P51790 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCN3P51790 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CLCN3P51790 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN3P51790 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN3P51790 PP12613-201ENST00000424958 2230 ntBASIC18.76■□□□□ 0.59
CLCN3P51790 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLCN3P51790 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCN3P51790 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLCN3P51790 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLCN3P51790 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN3P51790 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms