Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.87■□□□□ 0.45
MMP13P45452 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.87■□□□□ 0.45
MMP13P45452 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP13P45452 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP13P45452 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 LYSMD4-203ENST00000378904 2122 ntBASIC17.87■□□□□ 0.45
MMP13P45452 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 AL353593.2-201ENST00000602529 1483 ntBASIC17.87■□□□□ 0.45
MMP13P45452 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP13P45452 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP13P45452 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 TSPY19P-201ENST00000418461 509 ntBASIC17.86■□□□□ 0.45
MMP13P45452 TSPY18P-201ENST00000441642 509 ntBASIC17.86■□□□□ 0.45
MMP13P45452 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
MMP13P45452 AL139327.4-201ENST00000612362 153 ntBASIC17.86■□□□□ 0.45
MMP13P45452 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP13P45452 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP13P45452 AD001527.2-201ENST00000622994 785 ntBASIC17.86■□□□□ 0.45
MMP13P45452 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP13P45452 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.86■□□□□ 0.45
MMP13P45452 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP13P45452 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP13P45452 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
MMP13P45452 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.85■□□□□ 0.45
MMP13P45452 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.85■□□□□ 0.45
MMP13P45452 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.85■□□□□ 0.45
MMP13P45452 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.85■□□□□ 0.45
MMP13P45452 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.85■□□□□ 0.45
MMP13P45452 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 AC091304.2-201ENST00000564639 760 ntBASIC17.85■□□□□ 0.45
MMP13P45452 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 AL732292.2-201ENST00000609649 430 ntBASIC17.85■□□□□ 0.45
MMP13P45452 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.85■□□□□ 0.45
MMP13P45452 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.85■□□□□ 0.45
MMP13P45452 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MMP13P45452 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MMP13P45452 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 PCDHB17P-201ENST00000539533 2393 ntBASIC17.84■□□□□ 0.45
MMP13P45452 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MMP13P45452 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MMP13P45452 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms