Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMLP26374 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHMLP26374 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 AL118508.1-201ENST00000613502 2345 ntBASIC20.66■□□□□ 0.9
CHMLP26374 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CHMLP26374 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CHMLP26374 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMLP26374 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.66■□□□□ 0.9
CHMLP26374 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.66■□□□□ 0.9
CHMLP26374 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHMLP26374 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMLP26374 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMLP26374 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMLP26374 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMLP26374 HCG11-201ENST00000411553 5696 ntBASIC20.65■□□□□ 0.9
CHMLP26374 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMLP26374 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.65■□□□□ 0.9
CHMLP26374 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMLP26374 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 AC004706.3-202ENST00000621574 984 ntBASIC20.65■□□□□ 0.9
CHMLP26374 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMLP26374 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHMLP26374 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMLP26374 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CHMLP26374 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
CHMLP26374 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMLP26374 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMLP26374 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMLP26374 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMLP26374 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMLP26374 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHMLP26374 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 TUBB8P12-201ENST00000308911 1335 ntBASIC20.64■□□□□ 0.89
CHMLP26374 TUBB7P-202ENST00000428444 1305 ntBASIC20.64■□□□□ 0.89
CHMLP26374 TUBB8P7-204ENST00000567960 1332 ntBASIC20.64■□□□□ 0.89
CHMLP26374 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMLP26374 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMLP26374 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMLP26374 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMLP26374 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMLP26374 AC139887.3-201ENST00000568585 713 ntBASIC20.64■□□□□ 0.89
CHMLP26374 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.64■□□□□ 0.89
CHMLP26374 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMLP26374 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMLP26374 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMLP26374 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMLP26374 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CHMLP26374 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 DUSP5P1-201ENST00000441325 1139 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms