Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RAB4AP20338 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
RAB4AP20338 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RAB4AP20338 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB4AP20338 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.2□□□□□ -0.3
RAB4AP20338 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB4AP20338 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB4AP20338 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB4AP20338 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB4AP20338 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 MYC-209ENST00000641252 345 ntBASIC13.2□□□□□ -0.3
RAB4AP20338 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB4AP20338 AC133963.1-201ENST00000504166 1679 ntBASIC13.2□□□□□ -0.3
RAB4AP20338 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB4AP20338 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB4AP20338 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB4AP20338 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
RAB4AP20338 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RAB4AP20338 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB4AP20338 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 MIR564-202ENST00000385049 94 ntBASIC13.19□□□□□ -0.3
RAB4AP20338 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 AC080038.1-201ENST00000611274 1154 ntBASIC13.19□□□□□ -0.3
RAB4AP20338 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB4AP20338 AC073111.5-205ENST00000641717 521 ntBASIC13.19□□□□□ -0.3
RAB4AP20338 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB4AP20338 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms