Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NFKB1P19838 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
NFKB1P19838 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.46■□□□□ 0.39
NFKB1P19838 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 UNC93B7-201ENST00000509439 705 ntBASIC17.46■□□□□ 0.39
NFKB1P19838 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.46■□□□□ 0.39
NFKB1P19838 AL353135.1-201ENST00000606729 504 ntBASIC17.46■□□□□ 0.39
NFKB1P19838 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NFKB1P19838 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.46■□□□□ 0.39
NFKB1P19838 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NFKB1P19838 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
NFKB1P19838 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 NCF1C-201ENST00000438382 1427 ntBASIC17.46■□□□□ 0.39
NFKB1P19838 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NFKB1P19838 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
NFKB1P19838 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
NFKB1P19838 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NFKB1P19838 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NFKB1P19838 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
NFKB1P19838 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
NFKB1P19838 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NFKB1P19838 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.46■□□□□ 0.38
NFKB1P19838 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NFKB1P19838 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NFKB1P19838 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.45■□□□□ 0.38
NFKB1P19838 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.45■□□□□ 0.38
NFKB1P19838 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.45■□□□□ 0.38
NFKB1P19838 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.45■□□□□ 0.38
NFKB1P19838 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.45■□□□□ 0.38
NFKB1P19838 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NFKB1P19838 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.45■□□□□ 0.38
NFKB1P19838 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NFKB1P19838 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 AC099398.1-201ENST00000567919 2776 ntBASIC17.44■□□□□ 0.38
NFKB1P19838 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.44■□□□□ 0.38
NFKB1P19838 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NFKB1P19838 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.44■□□□□ 0.38
NFKB1P19838 DUSP5P1-201ENST00000441325 1139 ntBASIC17.44■□□□□ 0.38
NFKB1P19838 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.44■□□□□ 0.38
NFKB1P19838 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
NFKB1P19838 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms