Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSN3P07498 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CSN3P07498 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSN3P07498 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSN3P07498 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSN3P07498 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 AC125634.1-201ENST00000438758 1403 ntBASIC13.57□□□□□ -0.24
CSN3P07498 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.57□□□□□ -0.24
CSN3P07498 KRT18P31-201ENST00000506277 1292 ntBASIC13.57□□□□□ -0.24
CSN3P07498 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.57□□□□□ -0.24
CSN3P07498 AC009533.2-201ENST00000543664 586 ntBASIC13.57□□□□□ -0.24
CSN3P07498 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.57□□□□□ -0.24
CSN3P07498 AC091304.2-201ENST00000564639 760 ntBASIC13.57□□□□□ -0.24
CSN3P07498 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.57□□□□□ -0.24
CSN3P07498 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 AL732292.2-201ENST00000609649 430 ntBASIC13.57□□□□□ -0.24
CSN3P07498 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSN3P07498 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSN3P07498 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 AL118508.1-201ENST00000613502 2345 ntBASIC13.57□□□□□ -0.24
CSN3P07498 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.57□□□□□ -0.24
CSN3P07498 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.56□□□□□ -0.24
CSN3P07498 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CSN3P07498 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.56□□□□□ -0.24
CSN3P07498 NUS1P2-201ENST00000417358 873 ntBASIC13.56□□□□□ -0.24
CSN3P07498 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.56□□□□□ -0.24
CSN3P07498 KRT16P4-201ENST00000453883 522 ntBASIC13.56□□□□□ -0.24
CSN3P07498 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 AC096582.2-201ENST00000510860 516 ntBASIC13.56□□□□□ -0.24
CSN3P07498 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.56□□□□□ -0.24
CSN3P07498 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.56□□□□□ -0.24
CSN3P07498 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 NORAD-201ENST00000565493 5339 ntBASIC13.56□□□□□ -0.24
CSN3P07498 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSN3P07498 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSN3P07498 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.56□□□□□ -0.24
CSN3P07498 KRT8P47-201ENST00000604727 1398 ntBASIC13.56□□□□□ -0.24
CSN3P07498 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.56□□□□□ -0.24
CSN3P07498 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms