Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 KRT18P16-201ENST00000510337 1294 ntBASIC13.79□□□□□ -0.2
APOC3P02656 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.79□□□□□ -0.2
APOC3P02656 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 AC117489.1-201ENST00000625169 3217 ntBASIC13.79□□□□□ -0.2
APOC3P02656 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOC3P02656 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.79□□□□□ -0.2
APOC3P02656 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
APOC3P02656 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 AP003680.1-201ENST00000598970 3660 ntBASIC13.78□□□□□ -0.2
APOC3P02656 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOC3P02656 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.78□□□□□ -0.2
APOC3P02656 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
APOC3P02656 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOC3P02656 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
APOC3P02656 SDHAP2-201ENST00000455183 2001 ntBASIC13.78□□□□□ -0.2
APOC3P02656 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
APOC3P02656 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC3P02656 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC3P02656 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
APOC3P02656 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC3P02656 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
APOC3P02656 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
APOC3P02656 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC3P02656 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC3P02656 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOC3P02656 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms