Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 AC132938.5-201ENST00000624980 1813 ntBASIC15.53■□□□□ 0.08
PPP1R3DO95685 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 BX276092.5-203ENST00000456199 560 ntBASIC15.53■□□□□ 0.08
PPP1R3DO95685 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 AP005901.3-202ENST00000581653 237 ntBASIC15.53■□□□□ 0.08
PPP1R3DO95685 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 NTF6B-201ENST00000591913 560 ntBASIC15.53■□□□□ 0.08
PPP1R3DO95685 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.53■□□□□ 0.08
PPP1R3DO95685 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PPP1R3DO95685 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.53■□□□□ 0.08
PPP1R3DO95685 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 AC003669.1-201ENST00000334569 611 ntBASIC15.52■□□□□ 0.08
PPP1R3DO95685 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 CHCHD2P8-201ENST00000429873 447 ntBASIC15.52■□□□□ 0.08
PPP1R3DO95685 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 AL121672.3-201ENST00000608644 468 ntBASIC15.52■□□□□ 0.08
PPP1R3DO95685 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP1R3DO95685 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP1R3DO95685 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.52■□□□□ 0.07
PPP1R3DO95685 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 AL603756.1-201ENST00000606511 2163 ntBASIC15.52■□□□□ 0.07
PPP1R3DO95685 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.52■□□□□ 0.07
PPP1R3DO95685 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.52■□□□□ 0.07
PPP1R3DO95685 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PPP1R3DO95685 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP1R3DO95685 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms