Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PFDN1O60925 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.32■□□□□ 0.04
PFDN1O60925 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.32■□□□□ 0.04
PFDN1O60925 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.32■□□□□ 0.04
PFDN1O60925 CCDC92B-201ENST00000575506 885 ntBASIC15.32■□□□□ 0.04
PFDN1O60925 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 TSPY26P-201ENST00000476365 1326 ntBASIC15.32■□□□□ 0.04
PFDN1O60925 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PFDN1O60925 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.32■□□□□ 0.04
PFDN1O60925 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PFDN1O60925 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
PFDN1O60925 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
PFDN1O60925 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PFDN1O60925 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.31■□□□□ 0.04
PFDN1O60925 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PFDN1O60925 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PFDN1O60925 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.31■□□□□ 0.04
PFDN1O60925 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 KRT8P8-201ENST00000434750 1448 ntBASIC15.31■□□□□ 0.04
PFDN1O60925 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.31■□□□□ 0.04
PFDN1O60925 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.31■□□□□ 0.04
PFDN1O60925 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 AC006538.1-201ENST00000567905 1585 ntBASIC15.31■□□□□ 0.04
PFDN1O60925 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.31■□□□□ 0.04
PFDN1O60925 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN1O60925 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
PFDN1O60925 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PFDN1O60925 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.31■□□□□ 0.04
PFDN1O60925 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN1O60925 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms