Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 AC211486.1-202ENST00000416371 468 ntBASIC17.63■□□□□ 0.41
CACNG3O60359 AC211476.1-201ENST00000503899 468 ntBASIC17.63■□□□□ 0.41
CACNG3O60359 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 KRT19P2-202ENST00000557173 1012 ntBASIC17.63■□□□□ 0.41
CACNG3O60359 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNG3O60359 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CACNG3O60359 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CACNG3O60359 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CACNG3O60359 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 BCAR1-209ENST00000546196 1340 ntBASIC17.63■□□□□ 0.41
CACNG3O60359 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNG3O60359 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNG3O60359 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNG3O60359 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNG3O60359 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CACNG3O60359 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNG3O60359 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 AL121761.2-201ENST00000598007 1648 ntBASIC17.62■□□□□ 0.41
CACNG3O60359 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CACNG3O60359 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 PRORSD1P-202ENST00000563365 2154 ntBASIC17.62■□□□□ 0.41
CACNG3O60359 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CACNG3O60359 RPS8P6-201ENST00000426177 609 ntBASIC17.62■□□□□ 0.41
CACNG3O60359 MKNK2P1-201ENST00000437526 628 ntBASIC17.62■□□□□ 0.41
CACNG3O60359 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.62■□□□□ 0.41
CACNG3O60359 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.62■□□□□ 0.41
CACNG3O60359 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CACNG3O60359 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNG3O60359 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.62■□□□□ 0.41
CACNG3O60359 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNG3O60359 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNG3O60359 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNG3O60359 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.61■□□□□ 0.41
CACNG3O60359 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.61■□□□□ 0.41
CACNG3O60359 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNG3O60359 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 HTR5BP-201ENST00000430851 1154 ntBASIC17.61■□□□□ 0.41
CACNG3O60359 DNAJB3-202ENST00000449667 1266 ntBASIC17.61■□□□□ 0.41
CACNG3O60359 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 CXCL1P1-201ENST00000502804 216 ntBASIC17.61■□□□□ 0.41
CACNG3O60359 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
CACNG3O60359 MIR4469-201ENST00000583919 79 ntBASIC17.61■□□□□ 0.41
CACNG3O60359 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 AC007064.4-201ENST00000637740 555 ntBASIC17.61■□□□□ 0.41
CACNG3O60359 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CACNG3O60359 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNG3O60359 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CACNG3O60359 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CACNG3O60359 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNG3O60359 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNG3O60359 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNG3O60359 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNG3O60359 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNG3O60359 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNG3O60359 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms