Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSSCA1O60232 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SSSCA1O60232 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SSSCA1O60232 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.05□□□□□ -0.16
SSSCA1O60232 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.05□□□□□ -0.16
SSSCA1O60232 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 AC009154.2-201ENST00000621177 724 ntBASIC14.05□□□□□ -0.16
SSSCA1O60232 AC010653.2-201ENST00000623505 997 ntBASIC14.05□□□□□ -0.16
SSSCA1O60232 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.05□□□□□ -0.16
SSSCA1O60232 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SSSCA1O60232 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSSCA1O60232 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SSSCA1O60232 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AC002558.1-201ENST00000488906 803 ntBASIC14.04□□□□□ -0.16
SSSCA1O60232 AC124947.2-201ENST00000547118 1133 ntBASIC14.04□□□□□ -0.16
SSSCA1O60232 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AC024563.2-201ENST00000603282 481 ntBASIC14.04□□□□□ -0.16
SSSCA1O60232 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AL049637.2-201ENST00000641778 930 ntBASIC14.04□□□□□ -0.16
SSSCA1O60232 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.04□□□□□ -0.16
SSSCA1O60232 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms