Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A2O43868 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A2O43868 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC28A2O43868 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SLC28A2O43868 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
SLC28A2O43868 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC28A2O43868 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A2O43868 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SLC28A2O43868 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.57■□□□□ 0.24
SLC28A2O43868 UNC93B6-202ENST00000528242 690 ntBASIC16.57■□□□□ 0.24
SLC28A2O43868 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SLC28A2O43868 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC28A2O43868 AC005829.1-201ENST00000570002 483 ntBASIC16.57■□□□□ 0.24
SLC28A2O43868 AP002472.1-201ENST00000577490 586 ntBASIC16.57■□□□□ 0.24
SLC28A2O43868 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 CROCCP2-202ENST00000412962 2773 ntBASIC16.57■□□□□ 0.24
SLC28A2O43868 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SLC28A2O43868 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A2O43868 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A2O43868 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A2O43868 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A2O43868 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SLC28A2O43868 REXO1L11P-201ENST00000620964 1927 ntBASIC16.57■□□□□ 0.24
SLC28A2O43868 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 TP73-AS1-210ENST00000637775 1455 ntBASIC16.56■□□□□ 0.24
SLC28A2O43868 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 AC092474.2-201ENST00000424288 719 ntBASIC16.56■□□□□ 0.24
SLC28A2O43868 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC28A2O43868 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC28A2O43868 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A2O43868 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A2O43868 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A2O43868 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A2O43868 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A2O43868 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A2O43868 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms