Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AC139887.3-201ENST00000568585 713 ntBASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL590787.1-201ENST00000568856 1315 ntBASIC15.3■□□□□ 0.04
TRAF3IP2O43734 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL121912.1-201ENST00000603683 238 ntBASIC15.3■□□□□ 0.04
TRAF3IP2O43734 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL691432.3-201ENST00000621860 400 ntBASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP2O43734 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 RN7SL510P-201ENST00000581311 263 ntBASIC15.29■□□□□ 0.04
TRAF3IP2O43734 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 PRORSD1P-202ENST00000563365 2154 ntBASIC15.29■□□□□ 0.04
TRAF3IP2O43734 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP2O43734 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 AD000864.1-201ENST00000624076 2295 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms