Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.58■□□□□ 0.72
ATP2A1O14983 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2A1O14983 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2A1O14983 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATP2A1O14983 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATP2A1O14983 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATP2A1O14983 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ATP2A1O14983 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2A1O14983 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
ATP2A1O14983 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP2A1O14983 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2A1O14983 FAM86C2P-203ENST00000528684 1004 ntBASIC19.57■□□□□ 0.72
ATP2A1O14983 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATP2A1O14983 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATP2A1O14983 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATP2A1O14983 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2A1O14983 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2A1O14983 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2A1O14983 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2A1O14983 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.56■□□□□ 0.72
ATP2A1O14983 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
ATP2A1O14983 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2A1O14983 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2A1O14983 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2A1O14983 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2A1O14983 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2A1O14983 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2A1O14983 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ATP2A1O14983 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2A1O14983 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2A1O14983 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 AC026120.1-201ENST00000611536 926 ntBASIC19.55■□□□□ 0.72
ATP2A1O14983 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2A1O14983 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
ATP2A1O14983 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2A1O14983 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms