Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 MIR1224-201ENST00000408193 85 ntBASIC13.84□□□□□ -0.19
SRRM4A7MD48 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 SPDYE21P-201ENST00000413323 827 ntBASIC13.84□□□□□ -0.19
SRRM4A7MD48 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 NUS1P2-201ENST00000417358 873 ntBASIC13.84□□□□□ -0.19
SRRM4A7MD48 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 SIGLEC30P-201ENST00000455569 941 ntBASIC13.84□□□□□ -0.19
SRRM4A7MD48 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 AC093458.2-201ENST00000623150 629 ntBASIC13.84□□□□□ -0.19
SRRM4A7MD48 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 AC078925.2-201ENST00000624013 1973 ntBASIC13.83□□□□□ -0.19
SRRM4A7MD48 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRRM4A7MD48 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 NUS1P1-201ENST00000446295 882 ntBASIC13.83□□□□□ -0.2
SRRM4A7MD48 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 AC004817.3-201ENST00000602957 2129 ntBASIC13.83□□□□□ -0.2
SRRM4A7MD48 AL591684.3-201ENST00000605187 298 ntBASIC13.83□□□□□ -0.2
SRRM4A7MD48 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SRRM4A7MD48 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRRM4A7MD48 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AC092171.3-201ENST00000610122 2651 ntBASIC13.82□□□□□ -0.2
SRRM4A7MD48 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms