Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC092183.1-201ENST00000469884 875 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 RNA5SP416-201ENST00000516838 111 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC040169.1-201ENST00000565382 521 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 MIR3687-2-201ENST00000577708 61 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 MIR3687-1-201ENST00000614492 61 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 AC132938.6-201ENST00000623828 1655 ntBASIC15.48■□□□□ 0.07
TUBAL3A6NHL2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 BX005266.1-201ENST00000473402 457 ntBASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 UNC93B6-202ENST00000528242 690 ntBASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 AL691403.2-201ENST00000618460 490 ntBASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TUBAL3A6NHL2 AC079776.2-201ENST00000641154 1609 ntBASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 AP002414.3-201ENST00000589352 1468 ntBASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 AC022898.2-201ENST00000616822 1312 ntBASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 UPF3AP3-201ENST00000420996 769 ntBASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 AC096633.1-201ENST00000422446 749 ntBASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBAL3A6NHL2 DNAJB3-201ENST00000446806 729 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms