Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.26■□□□□ 0.51
RCCD1A6NED2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RCCD1A6NED2 LINC00554-201ENST00000564841 3011 ntBASIC18.25■□□□□ 0.51
RCCD1A6NED2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 IGHV3-41-201ENST00000613121 348 ntBASIC18.25■□□□□ 0.51
RCCD1A6NED2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 PAUPAR-201ENST00000630360 2965 ntBASIC18.25■□□□□ 0.51
RCCD1A6NED2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.25■□□□□ 0.51
RCCD1A6NED2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RCCD1A6NED2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 AL671277.2-201ENST00000458060 996 ntBASIC18.24■□□□□ 0.51
RCCD1A6NED2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 AC011840.4-201ENST00000578471 627 ntBASIC18.24■□□□□ 0.51
RCCD1A6NED2 AC011498.5-201ENST00000592027 486 ntBASIC18.24■□□□□ 0.51
RCCD1A6NED2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.24■□□□□ 0.51
RCCD1A6NED2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RCCD1A6NED2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms