Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC139795.1-202ENST00000500444 432 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC137630.3-201ENST00000607245 391 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC006449.6-201ENST00000612330 2296 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 COL6A4P2-202ENST00000504443 2753 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 KRT8P8-201ENST00000434750 1448 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 CES1P1-201ENST00000421606 1704 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 HLA-A-202ENST00000376806 1854 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SLC6A6P1-201ENST00000413933 1850 ntBASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC8.85□□□□□ -0.99
LINC01558Q9Y6Z2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 AL596087.1-201ENST00000400979 1969 ntBASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 KRT18P41-201ENST00000518924 1277 ntBASIC8.84□□□□□ -0.99
LINC01558Q9Y6Z2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms