Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 FAM220CP-201ENST00000395253 831 ntBASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 ATP5G1P1-201ENST00000448724 379 ntBASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 TSPY15P-201ENST00000457163 923 ntBASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 AL359075.1-203ENST00000462729 1002 ntBASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 AC145285.6-201ENST00000604632 637 ntBASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3M1Q9Y2T2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 GUSBP12-201ENST00000513727 720 ntBASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3M1Q9Y2T2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AC125634.1-201ENST00000438758 1403 ntBASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 SLC25A3P1-201ENST00000443844 931 ntBASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AC092597.1-201ENST00000487352 616 ntBASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3M1Q9Y2T2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms