Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 AC108860.2-201ENST00000562760 2183 ntBASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 OR7E47P-204ENST00000575924 449 ntBASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SPHK1Q9NYA1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 MRPL20P1-201ENST00000400819 433 ntBASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 KRT18P58-201ENST00000527480 1120 ntBASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 AC027601.4-201ENST00000611259 610 ntBASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 GGTLC5P-201ENST00000617623 998 ntBASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SPHK1Q9NYA1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SPHK1Q9NYA1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 MED15P5-201ENST00000423150 992 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 PMS2P1-201ENST00000431037 1228 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 VN2R19P-201ENST00000442399 1052 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 AC087163.2-201ENST00000457299 853 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 SLC25A6P2-201ENST00000497974 877 ntBASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPHK1Q9NYA1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms