Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 AL592071.1-201ENST00000611956 408 ntBASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 AC005915.1-201ENST00000624912 2018 ntBASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIN7CQ9NUP9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 AC096633.1-201ENST00000422446 749 ntBASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 ATP5G2P1-201ENST00000433580 426 ntBASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 VENTXP7-201ENST00000475503 772 ntBASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 AC046185.3-201ENST00000623228 1824 ntBASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIN7CQ9NUP9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 MTCL1P1-201ENST00000446207 792 ntBASIC14.3□□□□□ -0.12
LIN7CQ9NUP9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms