Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 AF186996.4-201ENST00000467186 377 ntBASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 AP002414.3-201ENST00000589352 1468 ntBASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 SLC25A6P4-201ENST00000586535 553 ntBASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 MIR7706-201ENST00000613747 67 ntBASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 FLJ38576-201ENST00000623820 2459 ntBASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BLOC1S4Q9NUP1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 AC009078.2-202ENST00000463353 338 ntBASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BLOC1S4Q9NUP1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RPS15P9-201ENST00000494093 319 ntBASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 AC136632.2-201ENST00000512891 861 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms