Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 AOC4P-203ENST00000566825 2289 ntBASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CDC42SE1Q9NRR8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 DNM1P41-201ENST00000623634 3350 ntBASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 GRAMD4P7-201ENST00000578182 1232 ntBASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
CDC42SE1Q9NRR8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 AC116353.5-201ENST00000638148 1699 ntBASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms