Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PMPCAP1-201ENST00000508114 1576 ntBASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC092053.1-201ENST00000605787 1936 ntBASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC074051.2-201ENST00000565115 352 ntBASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC012615.1-201ENST00000565797 1299 ntBASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC012183.1-201ENST00000625197 499 ntBASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NEUROD4Q9HD90 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 AC106886.4-201ENST00000623557 2502 ntBASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 AC004870.1-201ENST00000315132 882 ntBASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NEUROD4Q9HD90 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 GPR89P-201ENST00000407924 1495 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms