Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 NKAPP1-205ENST00000585790 367 ntBASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRMS1Q9HCU9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
BRMS1Q9HCU9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 LINC00982-205ENST00000420957 435 ntBASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 FGFR3P6-201ENST00000457012 610 ntBASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRMS1Q9HCU9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRMS1Q9HCU9 GPR89P-201ENST00000407924 1495 ntBASIC19.83■□□□□ 0.76
BRMS1Q9HCU9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
BRMS1Q9HCU9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRMS1Q9HCU9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms