Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC24A3Q9HC58 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC24A3Q9HC58 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.89■□□□□ 0.3
SLC24A3Q9HC58 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.89■□□□□ 0.3
SLC24A3Q9HC58 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.89■□□□□ 0.3
SLC24A3Q9HC58 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 IER3-202ENST00000376377 1350 ntBASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC24A3Q9HC58 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 KRT8P8-201ENST00000434750 1448 ntBASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 PCED1CP-201ENST00000419887 785 ntBASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC24A3Q9HC58 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms