Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1EQ9GZS1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 AC006504.4-201ENST00000592118 1568 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 AL031284.1-201ENST00000419297 478 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 AL121894.2-201ENST00000602977 491 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 MIR1199-201ENST00000621445 119 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 FAM215A-202ENST00000632077 792 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 AC092053.1-201ENST00000605787 1936 ntBASIC17.41■□□□□ 0.38
POLR1EQ9GZS1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 MRPL3P1-201ENST00000400109 1033 ntBASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC136632.2-201ENST00000512891 861 ntBASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC105339.3-201ENST00000560043 636 ntBASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 SLC25A6P4-201ENST00000586535 553 ntBASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 AC012313.1-201ENST00000593393 3059 ntBASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR1EQ9GZS1 OR6D1P-203ENST00000641209 4860 ntBASIC17.39■□□□□ 0.38
POLR1EQ9GZS1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.38
POLR1EQ9GZS1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
POLR1EQ9GZS1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
POLR1EQ9GZS1 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 FRMD8P1-201ENST00000440433 1524 ntBASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 AC073621.1-201ENST00000392730 636 ntBASIC17.39■□□□□ 0.37
POLR1EQ9GZS1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms