Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU4-4P-201ENST00000364588 130 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU6-167P-201ENST00000384292 106 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AL589655.1-201ENST00000405398 482 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 FAT1P1-201ENST00000406588 507 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 RN7SKP273-201ENST00000411392 314 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 ISCA1P1-201ENST00000426679 387 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 HMGB1P31-201ENST00000437242 427 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 CUBNP2-201ENST00000443534 1139 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 CFTRP1-201ENST00000456646 183 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 TPT1P1-201ENST00000458495 518 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU7-125P-201ENST00000458760 62 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AP001001.2-201ENST00000524966 409 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 MTCO2P15-201ENST00000532655 656 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC092851.1-201ENST00000535964 478 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC090115.2-201ENST00000548060 883 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 PTCD2P1-201ENST00000554393 1136 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AL136295.2-201ENST00000558478 747 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC01228-201ENST00000567966 623 ntTSL 3 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 ELOCP33-201ENST00000603716 632 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 U4.5-201ENST00000617137 123 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AP001065.3-201ENST00000622854 646 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC012358.2-201ENST00000430010 1434 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC091825.1-201ENST00000622952 2621 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010542.4-201ENST00000563151 1910 ntBASIC10.82□□□□□ -0.68
KRTAP3-3Q9BYR6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 C10orf53-201ENST00000374111 799 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL513174.1-201ENST00000423182 629 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 GALP-202ENST00000440823 889 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms