RNA–Protein interactions for RNA: ENST00000456646.1

CFTRP1-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 1, humanhuman

BASIC

Gene CFTRP1, Length 183 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP1-201ENST00000456646 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
CFTRP1-201ENST00000456646 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
CFTRP1-201ENST00000456646 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CFTRP1-201ENST00000456646 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
CFTRP1-201ENST00000456646 FOXD1Q16676 465 aa19.35■□□□□ 0.69
CFTRP1-201ENST00000456646 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
CFTRP1-201ENST00000456646 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
CFTRP1-201ENST00000456646 MSH5O43196 834 aa18.46■□□□□ 0.55
CFTRP1-201ENST00000456646 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
CFTRP1-201ENST00000456646 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CFTRP1-201ENST00000456646 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
CFTRP1-201ENST00000456646 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
CFTRP1-201ENST00000456646 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
CFTRP1-201ENST00000456646 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CFTRP1-201ENST00000456646 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
CFTRP1-201ENST00000456646 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
CFTRP1-201ENST00000456646 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
CFTRP1-201ENST00000456646 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
CFTRP1-201ENST00000456646 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
CFTRP1-201ENST00000456646 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
CFTRP1-201ENST00000456646 KCNA4P22459 653 aa15.91■□□□□ 0.14
CFTRP1-201ENST00000456646 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
CFTRP1-201ENST00000456646 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
CFTRP1-201ENST00000456646 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
CFTRP1-201ENST00000456646 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
CFTRP1-201ENST00000456646 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
CFTRP1-201ENST00000456646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
CFTRP1-201ENST00000456646 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
CFTRP1-201ENST00000456646 SLC4A2P04920 1241 aa15.07■□□□□ 0
CFTRP1-201ENST00000456646 POTEHQ6S545 545 aa14.96□□□□□ -0.01
CFTRP1-201ENST00000456646 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
CFTRP1-201ENST00000456646 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
CFTRP1-201ENST00000456646 ZBTB22O15209 634 aa14.66□□□□□ -0.06
CFTRP1-201ENST00000456646 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
CFTRP1-201ENST00000456646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
CFTRP1-201ENST00000456646 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
CFTRP1-201ENST00000456646 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CFTRP1-201ENST00000456646 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
CFTRP1-201ENST00000456646 APLP2Q06481 763 aa14.54□□□□□ -0.08
CFTRP1-201ENST00000456646 CAPN15O75808 1086 aa14.49□□□□□ -0.09
CFTRP1-201ENST00000456646 DSG3P32926 999 aa14.39□□□□□ -0.11
CFTRP1-201ENST00000456646 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
CFTRP1-201ENST00000456646 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
CFTRP1-201ENST00000456646 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CFTRP1-201ENST00000456646 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
CFTRP1-201ENST00000456646 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
CFTRP1-201ENST00000456646 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
CFTRP1-201ENST00000456646 ABCB7O75027 752 aa14.2□□□□□ -0.14
CFTRP1-201ENST00000456646 POLA2Q14181 598 aa14.11□□□□□ -0.15
CFTRP1-201ENST00000456646 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
CFTRP1-201ENST00000456646 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
CFTRP1-201ENST00000456646 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
CFTRP1-201ENST00000456646 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
CFTRP1-201ENST00000456646 FBLN2P98095 1184 aa13.67□□□□□ -0.22
CFTRP1-201ENST00000456646 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
CFTRP1-201ENST00000456646 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
CFTRP1-201ENST00000456646 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CFTRP1-201ENST00000456646 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
CFTRP1-201ENST00000456646 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
CFTRP1-201ENST00000456646 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
CFTRP1-201ENST00000456646 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
CFTRP1-201ENST00000456646 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
CFTRP1-201ENST00000456646 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
CFTRP1-201ENST00000456646 HAX1O00165 279 aa13.18□□□□□ -0.3
CFTRP1-201ENST00000456646 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
CFTRP1-201ENST00000456646 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
CFTRP1-201ENST00000456646 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
CFTRP1-201ENST00000456646 PROM2Q8N271 834 aa13.04□□□□□ -0.32
CFTRP1-201ENST00000456646 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CFTRP1-201ENST00000456646 EVX2Q03828 476 aa12.96□□□□□ -0.33
CFTRP1-201ENST00000456646 FKBP8Q14318 412 aa12.93□□□□□ -0.34
CFTRP1-201ENST00000456646 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
CFTRP1-201ENST00000456646 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
CFTRP1-201ENST00000456646 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
CFTRP1-201ENST00000456646 LHX8Q68G74 356 aa12.79□□□□□ -0.36
CFTRP1-201ENST00000456646 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
CFTRP1-201ENST00000456646 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
CFTRP1-201ENST00000456646 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
CFTRP1-201ENST00000456646 GABBR2O75899 941 aa12.66□□□□□ -0.38
CFTRP1-201ENST00000456646 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
CFTRP1-201ENST00000456646 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
CFTRP1-201ENST00000456646 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
CFTRP1-201ENST00000456646 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
CFTRP1-201ENST00000456646 MIER1Q8N108 512 aa12.52□□□□□ -0.41
CFTRP1-201ENST00000456646 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
CFTRP1-201ENST00000456646 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
CFTRP1-201ENST00000456646 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
CFTRP1-201ENST00000456646 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
CFTRP1-201ENST00000456646 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
CFTRP1-201ENST00000456646 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CFTRP1-201ENST00000456646 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
CFTRP1-201ENST00000456646 CLCN6P51797 869 aa12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
CFTRP1-201ENST00000456646 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
CFTRP1-201ENST00000456646 NUBP1P53384 320 aa12.29□□□□□ -0.44
CFTRP1-201ENST00000456646 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 484.5 ms