RNA–Protein interactions for RNA: ENST00000453862.1

LINC00456-201, long intergenic non-protein coding RNA 456, humanhuman

TSL 3 BASIC

Gene LINC00456, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00456-201ENST00000453862 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
LINC00456-201ENST00000453862 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
LINC00456-201ENST00000453862 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
LINC00456-201ENST00000453862 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
LINC00456-201ENST00000453862 FOXD1Q16676 465 aa19.33■□□□□ 0.68
LINC00456-201ENST00000453862 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
LINC00456-201ENST00000453862 MSH5O43196 834 aa18.18■□□□□ 0.5
LINC00456-201ENST00000453862 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
LINC00456-201ENST00000453862 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
LINC00456-201ENST00000453862 ADRA2BP18089 450 aa17.62■□□□□ 0.41
LINC00456-201ENST00000453862 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
LINC00456-201ENST00000453862 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
LINC00456-201ENST00000453862 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
LINC00456-201ENST00000453862 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
LINC00456-201ENST00000453862 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LINC00456-201ENST00000453862 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
LINC00456-201ENST00000453862 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
LINC00456-201ENST00000453862 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
LINC00456-201ENST00000453862 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
LINC00456-201ENST00000453862 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
LINC00456-201ENST00000453862 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
LINC00456-201ENST00000453862 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
LINC00456-201ENST00000453862 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
LINC00456-201ENST00000453862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
LINC00456-201ENST00000453862 POTEHQ6S545 545 aa14.57□□□□□ -0.08
LINC00456-201ENST00000453862 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
LINC00456-201ENST00000453862 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
LINC00456-201ENST00000453862 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
LINC00456-201ENST00000453862 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
LINC00456-201ENST00000453862 DSG3P32926 999 aa14.37□□□□□ -0.11
LINC00456-201ENST00000453862 CAPN15O75808 1086 aa14.34□□□□□ -0.11
LINC00456-201ENST00000453862 ABCB7O75027 752 aa14.03□□□□□ -0.16
LINC00456-201ENST00000453862 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
LINC00456-201ENST00000453862 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
LINC00456-201ENST00000453862 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
LINC00456-201ENST00000453862 APLP2Q06481 763 aa13.77□□□□□ -0.21
LINC00456-201ENST00000453862 KCNA4P22459 653 aa13.74□□□□□ -0.21
LINC00456-201ENST00000453862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
LINC00456-201ENST00000453862 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
LINC00456-201ENST00000453862 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
LINC00456-201ENST00000453862 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
LINC00456-201ENST00000453862 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
LINC00456-201ENST00000453862 POLA2Q14181 598 aa13.48□□□□□ -0.25
LINC00456-201ENST00000453862 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
LINC00456-201ENST00000453862 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
LINC00456-201ENST00000453862 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
LINC00456-201ENST00000453862 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
LINC00456-201ENST00000453862 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
LINC00456-201ENST00000453862 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
LINC00456-201ENST00000453862 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
LINC00456-201ENST00000453862 HAX1O00165 279 aa13.11□□□□□ -0.31
LINC00456-201ENST00000453862 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
LINC00456-201ENST00000453862 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
LINC00456-201ENST00000453862 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00456-201ENST00000453862 EVX2Q03828 476 aa13□□□□□ -0.33
LINC00456-201ENST00000453862 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
LINC00456-201ENST00000453862 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
LINC00456-201ENST00000453862 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
LINC00456-201ENST00000453862 ZBTB22O15209 634 aa12.66□□□□□ -0.38
LINC00456-201ENST00000453862 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
LINC00456-201ENST00000453862 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
LINC00456-201ENST00000453862 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
LINC00456-201ENST00000453862 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
LINC00456-201ENST00000453862 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
LINC00456-201ENST00000453862 GABBR2O75899 941 aa12.59□□□□□ -0.39
LINC00456-201ENST00000453862 LHX8Q68G74 356 aa12.57□□□□□ -0.4
LINC00456-201ENST00000453862 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
LINC00456-201ENST00000453862 FBLN2P98095 1184 aa12.55□□□□□ -0.4
LINC00456-201ENST00000453862 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
LINC00456-201ENST00000453862 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
LINC00456-201ENST00000453862 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
LINC00456-201ENST00000453862 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
LINC00456-201ENST00000453862 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
LINC00456-201ENST00000453862 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
LINC00456-201ENST00000453862 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
LINC00456-201ENST00000453862 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00456-201ENST00000453862 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
LINC00456-201ENST00000453862 PLSCR2Q9NRY7 297 aa12.26□□□□□ -0.45
LINC00456-201ENST00000453862 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
LINC00456-201ENST00000453862 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
LINC00456-201ENST00000453862 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
LINC00456-201ENST00000453862 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
LINC00456-201ENST00000453862 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
LINC00456-201ENST00000453862 CLCN6P51797 869 aa12.01□□□□□ -0.49
LINC00456-201ENST00000453862 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
LINC00456-201ENST00000453862 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
LINC00456-201ENST00000453862 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
LINC00456-201ENST00000453862 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
LINC00456-201ENST00000453862 POTEMA6NI47 508 aa11.88□□□□□ -0.51
LINC00456-201ENST00000453862 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
LINC00456-201ENST00000453862 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
LINC00456-201ENST00000453862 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
LINC00456-201ENST00000453862 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
LINC00456-201ENST00000453862 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
LINC00456-201ENST00000453862 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
LINC00456-201ENST00000453862 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
LINC00456-201ENST00000453862 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
LINC00456-201ENST00000453862 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
LINC00456-201ENST00000453862 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
LINC00456-201ENST00000453862 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms