Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 FRMD8P1-201ENST00000440433 1524 ntBASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC246785.2-201ENST00000432512 513 ntBASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC009533.2-201ENST00000543664 586 ntBASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC011498.5-201ENST00000592027 486 ntBASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SHANK2-AS3Q9BTD1 DOC2GP-204ENST00000639052 2548 ntBASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 KLF4P1-201ENST00000412782 1185 ntBASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AP002490.2-201ENST00000524791 560 ntBASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC022616.7-201ENST00000525383 220 ntBASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms