Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL13Q99616 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL13Q99616 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL13Q99616 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CCL13Q99616 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL13Q99616 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCL13Q99616 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL13Q99616 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL13Q99616 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL13Q99616 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.4□□□□□ -0.1
CCL13Q99616 AL662844.1-201ENST00000546340 181 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 SLC25A6P4-201ENST00000586535 553 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 AL353135.1-201ENST00000606729 504 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 AL139424.1-201ENST00000607572 797 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL13Q99616 AC004706.3-202ENST00000621574 984 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 FAM215A-202ENST00000632077 792 ntBASIC14.4□□□□□ -0.1
CCL13Q99616 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCL13Q99616 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL13Q99616 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL13Q99616 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CCL13Q99616 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.11
CCL13Q99616 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCL13Q99616 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL13Q99616 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL13Q99616 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL13Q99616 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL13Q99616 AC079776.4-201ENST00000511039 504 ntBASIC14.39□□□□□ -0.11
CCL13Q99616 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL13Q99616 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.39□□□□□ -0.11
CCL13Q99616 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL13Q99616 AP001005.1-201ENST00000571755 1248 ntBASIC14.39□□□□□ -0.11
CCL13Q99616 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL13Q99616 AC006557.2-201ENST00000592985 1240 ntBASIC14.39□□□□□ -0.11
CCL13Q99616 AL049840.3-201ENST00000602669 611 ntBASIC14.39□□□□□ -0.11
CCL13Q99616 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL13Q99616 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL13Q99616 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms