Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 HMGA1P7-201ENST00000406908 502 ntBASIC18.36■□□□□ 0.53
YME1L1Q96TA2 SPDYE7P-202ENST00000420373 878 ntBASIC18.36■□□□□ 0.53
YME1L1Q96TA2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 AC026150.2-201ENST00000564693 1156 ntBASIC18.36■□□□□ 0.53
YME1L1Q96TA2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YME1L1Q96TA2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AC008677.1-201ENST00000519230 1561 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 UGT1A2P-201ENST00000454886 866 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AL512638.1-201ENST00000457493 794 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 SLC25A39P2-201ENST00000537614 270 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AC005225.4-201ENST00000557330 545 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 KRT8P23-201ENST00000560090 1207 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
YME1L1Q96TA2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
YME1L1Q96TA2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AC012569.1-201ENST00000591191 1524 ntBASIC18.34■□□□□ 0.53
YME1L1Q96TA2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 MIR661-201ENST00000384842 89 ntBASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AL009183.1-201ENST00000603760 355 ntBASIC18.34■□□□□ 0.53
YME1L1Q96TA2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.34■□□□□ 0.53
YME1L1Q96TA2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
YME1L1Q96TA2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
YME1L1Q96TA2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
YME1L1Q96TA2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.33■□□□□ 0.53
YME1L1Q96TA2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms