Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC3BQ96PB8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 UXT-AS1-201ENST00000590504 1525 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 AL390961.4-201ENST00000623958 2535 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 RNU1-129P-201ENST00000384064 167 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 CNN2P2-201ENST00000443536 909 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 CNN2P3-201ENST00000450201 906 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 AC093214.1-201ENST00000511688 1107 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 U1.21-201ENST00000580816 167 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 AL136317.3-201ENST00000618497 906 ntBASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC3BQ96PB8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 TOP3BP1-201ENST00000420768 1380 ntBASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 MIR943-201ENST00000401286 94 ntBASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 SLC25A39P2-201ENST00000537614 270 ntBASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 AC093525.9-201ENST00000624961 1746 ntBASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3BQ96PB8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 MIR661-201ENST00000384842 89 ntBASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 UGT1A2P-201ENST00000454886 866 ntBASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 IGHV3-62-201ENST00000520057 340 ntBASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 KRT8P23-201ENST00000560090 1207 ntBASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 AJ011932.1-201ENST00000621707 465 ntBASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3BQ96PB8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms