Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASD1Q96PB1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 WASH6P-202ENST00000359512 1437 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 SPDYE14P-201ENST00000442619 822 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 RNA5SP421-201ENST00000516864 134 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 AC091167.2-201ENST00000579581 588 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 AC138761.1-201ENST00000584393 385 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.18■□□□□ 0.5
CASD1Q96PB1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 AC093525.9-201ENST00000624961 1746 ntBASIC18.18■□□□□ 0.5
CASD1Q96PB1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASD1Q96PB1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 AC016396.2-201ENST00000562575 1417 ntBASIC18.17■□□□□ 0.5
CASD1Q96PB1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 MIR943-201ENST00000401286 94 ntBASIC18.17■□□□□ 0.5
CASD1Q96PB1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 KLF2P3-201ENST00000451977 1087 ntBASIC18.17■□□□□ 0.5
CASD1Q96PB1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 AL031055.1-201ENST00000606362 631 ntBASIC18.17■□□□□ 0.5
CASD1Q96PB1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASD1Q96PB1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASD1Q96PB1 AC008677.1-201ENST00000519230 1561 ntBASIC18.17■□□□□ 0.5
CASD1Q96PB1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.16■□□□□ 0.5
CASD1Q96PB1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 AC008764.6-201ENST00000595909 2069 ntBASIC18.16■□□□□ 0.5
CASD1Q96PB1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASD1Q96PB1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms