Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.53□□□□□ -0.4
CHCHD1Q96BP2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHCHD1Q96BP2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 KRT18P23-201ENST00000435622 1283 ntBASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 AL355355.2-201ENST00000442321 338 ntBASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 PNMA6B-201ENST00000538162 1200 ntBASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 LINC00167-201ENST00000530583 1419 ntBASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CHCHD1Q96BP2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 AL391256.1-201ENST00000443260 1855 ntBASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms