Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.03■□□□□ 0.64
HPS3Q969F9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HPS3Q969F9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 PRYP5-201ENST00000451909 266 ntBASIC19.03■□□□□ 0.64
HPS3Q969F9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS3Q969F9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.03■□□□□ 0.64
HPS3Q969F9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS3Q969F9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 AL139288.1-201ENST00000623748 933 ntBASIC19.03■□□□□ 0.64
HPS3Q969F9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS3Q969F9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS3Q969F9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS3Q969F9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 GPR89P-201ENST00000407924 1495 ntBASIC19.03■□□□□ 0.64
HPS3Q969F9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS3Q969F9 UBALD1-205ENST00000590891 2641 ntBASIC19.03■□□□□ 0.64
HPS3Q969F9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS3Q969F9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS3Q969F9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HPS3Q969F9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.02■□□□□ 0.64
HPS3Q969F9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HPS3Q969F9 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.02■□□□□ 0.64
HPS3Q969F9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HPS3Q969F9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS3Q969F9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.02■□□□□ 0.64
HPS3Q969F9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.02■□□□□ 0.64
HPS3Q969F9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.02■□□□□ 0.64
HPS3Q969F9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.02■□□□□ 0.64
HPS3Q969F9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.02■□□□□ 0.64
HPS3Q969F9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.02■□□□□ 0.64
HPS3Q969F9 AC021087.4-201ENST00000563761 564 ntBASIC19.02■□□□□ 0.64
HPS3Q969F9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.02■□□□□ 0.64
HPS3Q969F9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.02■□□□□ 0.64
HPS3Q969F9 MTDHP4-201ENST00000600287 670 ntBASIC19.02■□□□□ 0.64
HPS3Q969F9 AC025062.2-201ENST00000605477 670 ntBASIC19.02■□□□□ 0.64
HPS3Q969F9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.02■□□□□ 0.64
HPS3Q969F9 TP73-AS1-207ENST00000624167 988 ntBASIC19.02■□□□□ 0.64
HPS3Q969F9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS3Q969F9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS3Q969F9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
HPS3Q969F9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS3Q969F9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HPS3Q969F9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS3Q969F9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.02■□□□□ 0.63
HPS3Q969F9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS3Q969F9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS3Q969F9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HPS3Q969F9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.01■□□□□ 0.63
HPS3Q969F9 AL353135.1-201ENST00000606729 504 ntBASIC19.01■□□□□ 0.63
HPS3Q969F9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 AL691432.3-201ENST00000621860 400 ntBASIC19.01■□□□□ 0.63
HPS3Q969F9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HPS3Q969F9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS3Q969F9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS3Q969F9 AC078925.2-201ENST00000624013 1973 ntBASIC19.01■□□□□ 0.63
HPS3Q969F9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS3Q969F9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HPS3Q969F9 AL590787.1-201ENST00000568856 1315 ntBASIC19■□□□□ 0.63
HPS3Q969F9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS3Q969F9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19■□□□□ 0.63
HPS3Q969F9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms