Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCNB3Q8WWL7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CCNB3Q8WWL7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 RN7SL589P-201ENST00000481268 310 ntBASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 FAM86C2P-203ENST00000528684 1004 ntBASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 AL096865.1-201ENST00000606796 927 ntBASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 AC093525.9-201ENST00000624961 1746 ntBASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.23■■□□□ 1.79
CCNB3Q8WWL7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 AL671277.1-201ENST00000429656 993 ntBASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 AL135744.1-201ENST00000565098 629 ntBASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 MIR4515-201ENST00000584082 81 ntBASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC26.22■■□□□ 1.79
CCNB3Q8WWL7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 AC079140.1-201ENST00000508039 487 ntBASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 PCDHB18P-201ENST00000524813 2368 ntBASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC26.21■■□□□ 1.79
CCNB3Q8WWL7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 FAM86GP-201ENST00000448322 971 ntBASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 Z92544.3-201ENST00000624747 417 ntBASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC26.2■■□□□ 1.79
CCNB3Q8WWL7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CCNB3Q8WWL7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCNB3Q8WWL7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CCNB3Q8WWL7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNB3Q8WWL7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.2■■□□□ 1.78
CCNB3Q8WWL7 CD99-202ENST00000381180 530 ntTSL 2 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms